Mini-InternVL2-DA-Medical

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Introduction

We release the adaptation models for the specific domains: autonomous driving, medical images, and remote sensing.

These models are built upon Mini-InternVL and fine-tuned using a unified adaptation framework, achieving good performance on tasks in specific domains.

The script for evaluation is in the document.

Training datasets

• General domain dataset:

  ShareGPT4V, AllSeeingV2, LLaVA-Instruct-ZH, DVQA, ChartQA, AI2D, DocVQA, GeoQA+, SynthDoG-EN

• Medicalt dataset:

  PMC-OA, MedICaT, Open-i, MedPix, Quilt-1M, RP3D, MIMIC-CXR, Retina Image Bank and others

Quick Start

We provide an example code to run Mini-InternVL2-4B using transformers.

Please use transformers>=4.37.2 to ensure the model works normally.

import numpy as np
import torch
import torchvision.transforms as T
from decord import VideoReader, cpu
from PIL import Image
from torchvision.transforms.functional import InterpolationMode
from transformers import AutoModel, AutoTokenizer

IMAGENET_MEAN = (0.485, 0.456, 0.406)
IMAGENET_STD = (0.229, 0.224, 0.225)

def build_transform(input_size):
    MEAN, STD = IMAGENET_MEAN, IMAGENET_STD
    transform = T.Compose([
        T.Lambda(lambda img: img.convert('RGB') if img.mode != 'RGB' else img),
        T.Resize((input_size, input_size), interpolation=InterpolationMode.BICUBIC),
        T.ToTensor(),
        T.Normalize(mean=MEAN, std=STD)
    ])
    return transform

def find_closest_aspect_ratio(aspect_ratio, target_ratios, width, height, image_size):
    best_ratio_diff = float('inf')
    best_ratio = (1, 1)
    area = width * height
    for ratio in target_ratios:
        target_aspect_ratio = ratio[0] / ratio[1]
        ratio_diff = abs(aspect_ratio - target_aspect_ratio)
        if ratio_diff < best_ratio_diff:
            best_ratio_diff = ratio_diff
            best_ratio = ratio
        elif ratio_diff == best_ratio_diff:
            if area > 0.5 * image_size * image_size * ratio[0] * ratio[1]:
                best_ratio = ratio
    return best_ratio

def dynamic_preprocess(image, min_num=1, max_num=12, image_size=448, use_thumbnail=False):
    orig_width, orig_height = image.size
    aspect_ratio = orig_width / orig_height

    # calculate the existing image aspect ratio
    target_ratios = set(
        (i, j) for n in range(min_num, max_num + 1) for i in range(1, n + 1) for j in range(1, n + 1) if
        i * j = min_num)
    target_ratios = sorted(target_ratios, key=lambda x: x[0] * x[1])

    # find the closest aspect ratio to the target
    target_aspect_ratio = find_closest_aspect_ratio(
        aspect_ratio, target_ratios, orig_width, orig_height, image_size)

    # calculate the target width and height
    target_width = image_size * target_aspect_ratio[0]
    target_height = image_size * target_aspect_ratio[1]
    blocks = target_aspect_ratio[0] * target_aspect_ratio[1]

    # resize the image
    resized_img = image.resize((target_width, target_height))
    processed_images = []
    for i in range(blocks):
        box = (
            (i % (target_width // image_size)) * image_size,
            (i // (target_width // image_size)) * image_size,
            ((i % (target_width // image_size)) + 1) * image_size,
            ((i // (target_width // image_size)) + 1) * image_size
        )
        # split the image
        split_img = resized_img.crop(box)
        processed_images.append(split_img)
    assert len(processed_images) == blocks
    if use_thumbnail and len(processed_images) != 1:
        thumbnail_img = image.resize((image_size, image_size))
        processed_images.append(thumbnail_img)
    return processed_images

def load_image(image_file, input_size=448, max_num=12):
    image = Image.open(image_file).convert('RGB')
    transform = build_transform(input_size=input_size)
    images = dynamic_preprocess(image, image_size=input_size, use_thumbnail=True, max_num=max_num)
    pixel_values = [transform(image) for image in images]
    pixel_values = torch.stack(pixel_values)
    return pixel_values

# If you want to load a model using multiple GPUs, please refer to the `Multiple GPUs` section.
path = 'OpenGVLab/Mini-InternVL2-4B-DA-Medical'
model = AutoModel.from_pretrained(
    path,
    torch_dtype=torch.bfloat16,
    low_cpu_mem_usage=True,
    use_flash_attn=True,
    trust_remote_code=True).eval().cuda()
tokenizer = AutoTokenizer.from_pretrained(path, trust_remote_code=True, use_fast=False)

# set the max number of tiles in `max_num`
pixel_values = load_image('path/to/image.jpg', max_num=12).to(torch.bfloat16).cuda()
generation_config = dict(max_new_tokens=1024, do_sample=True)

# pure-text conversation (纯文本对话)
question = 'Hello, who are you?'
response, history = model.chat(tokenizer, None, question, generation_config, history=None, return_history=True)
print(f'User: {question}\nAssistant: {response}')

question = 'Can you tell me a story?'
response, history = model.chat(tokenizer, None, question, generation_config, history=history, return_history=True)
print(f'User: {question}\nAssistant: {response}')

# single-image single-round conversation (单图单轮对话)
question = '\nPlease describe the image shortly.'
response = model.chat(tokenizer, pixel_values, question, generation_